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EVcouplings databases
Genomes from NCBI RefSeq database
GMAP-GSNAP database (human genome)
GTDB
Illumina iGenomes
Kraken2
MGnify
NCBI BLAST databases
NCBI RefSeq database
Parameters of AlphaFold
Parameters of Evolutionary Scale Modeling (ESM) models
PDB70
PINDER
PLINDER
Protein Data Bank
Protein Data Bank database in mmCIF format
Protein Data Bank database in SEQRES records
Tara Oceans 18S amplicon
Tara Oceans MATOU gene catalog
Tara Oceans MGT transcriptomes
Tattabio
Uniclust30
UniProtKB
UniRef100
UniRef30
UniRef90
Updated databases for ColabFold
Using HuggingFace Datasets
Contributing to these docs
Documentation
Requesting An Account
Get Started
Quick Start
Common Terms
HPC Resources
Theory of HPC
Overview of threads, cores, and sockets in Slurm for HPC workflows
Git Guide
Connecting to Unity
SSH
Unity OnDemand
Connecting to Desktop VS Code
Get Help
Frequently Asked Questions
How to Ask for Help
Troubleshooting
Cluster Specifications
Node List
Partition List
Storage
Node Features (Constraints)
NVLink and NVSwitch
CPU Summary List
GPU Summary List
Managing Files
Command Line Interface (CLI)
Disk Quotas
FileZilla
Globus
RStor Research Storage System
Managing RStor Shares
RStor Usage
The Allocation Portal
Scratch: HPC Workspace
Unity OnDemand File Browser
Submitting Jobs
Batch Jobs
Array Batch Jobs
Large Job Counts
Monitor a batch job
Helper Scripts
Interactive CLI Jobs
Unity OnDemand
Message Passing Interface (MPI)
Slurm cheat sheet
Managing group resource use
Software Management
Building Software from Scratch
Conda
Modules
Module Usage
Renv
Unity OnDemand
JupyterLab OnDemand
Venv
Tools & Software
ColabFold
PyTorch
R
R Parallelization
Unity GPUs
Datasets
AI and ML
expand_more
chevron_right
Aleph-Alpha
Alibaba-NLP
Allen AI
AlpacaFarm
Amass
Audioset
BAAI
Bigcode
Biomed Clip
Blip 2
Bloom
ByteDance
COCO
Code Llama
DeepAccident
DeepSeek
DeSTA
Diffa
DINO v2
epic-kitchens
Falcon
Florence
FLUX.1 Kontext
Fomo
Gemma
Genmo
Glm
GPT
HiDream-I1
Ibm Granite
Idefics2
Imagenet 1K
Inaturalist
Infly
InternLM
Internvl3-8b-hf
Intfloat
Kinetics
LG
Linq
Llama2
Llama3
Llama4
Llava_OneVision
LLM-compiler
LMSys
Lumina
Mims
Mixtral
Monai
Moonshot-ai
Msmarco
Natural-questions
Nvidia
Objaverse
Openai-whisper
Perplexity AI
Phi
Playgroundai
Pythia
Qwen
Qwen2
Qwen3
Rag-sequence-nq
S1-32B
Scalabilityai
Sft
SlimPajama
T5
Tulu
V2X
Video-MAE
Vit
Wildchat
Bioinformatics
expand_more
chevron_right
AlphaFold3 Databases
BFD/MGnify
Big Fantastic Database
checkm
ColabFoldDB
Databases for ColabFold
dfam
EggNOG - version 5.0
EggNOG - version 6.0
EVcouplings databases
Genomes from NCBI RefSeq database
GMAP-GSNAP database (human genome)
GTDB
Illumina iGenomes
Kraken2
MGnify
NCBI BLAST databases
NCBI RefSeq database
Parameters of AlphaFold
Parameters of Evolutionary Scale Modeling (ESM) models
PDB70
PINDER
PLINDER
Protein Data Bank
Protein Data Bank database in mmCIF format
Protein Data Bank database in SEQRES records
Tara Oceans 18S amplicon
Tara Oceans MATOU gene catalog
Tara Oceans MGT transcriptomes
Tattabio
Uniclust30
UniProtKB
UniRef100
UniRef30
UniRef90
Updated databases for ColabFold
Using HuggingFace Datasets
Contributing to these docs
Unity
Documentation
Tools & Software
Tools & Software
Articles on specific tools and software available on Unity.
Articles in Tools & Software
description
ColabFold
Documentation for ColabFold.
description
PyTorch
Documentation for PyTorch.
description
R
Documentation for R.
description
Unity GPUs
Documentation for Unity GPUs.
Last modified: Monday, February 9, 2026 at 8:29 AM.
See the commit on GitLab.
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